STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0006194TMEM131_like domain-containing protein. (1912 aa)    
Predicted Functional Partners:
chiPu_0013103
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
   0.713
chiPu_0016552
Rap-GAP domain-containing protein.
   
  
 0.649
chiPu_0001062
Uncharacterized protein.
      
 0.502
chiPu_0002080
N-acetyltransferase domain-containing protein.
      
 0.463
chiPu_0000435
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.439
chiPu_0000625
Thioredoxin domain-containing protein.
      
 0.416
chiPu_0017286
Uncharacterized protein.
      
 0.410
chiPu_0005186
PNPLA domain-containing protein.
      
 0.410
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.