STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0006650Uncharacterized protein. (537 aa)    
Predicted Functional Partners:
chiPu_0013174
Uncharacterized protein.
   
 
 0.978
chiPu_0005974
DBR1 domain-containing protein.
   
 
0.889
chiPu_0019328
LRRcap domain-containing protein.
    
   0.761
chiPu_0001197
Uncharacterized protein.
    
   0.733
chiPu_0019121
Uncharacterized protein.
    
   0.709
chiPu_0004926
Uncharacterized protein.
    
   0.709
chiPu_0004927
Uncharacterized protein.
    
   0.709
chiPu_0014610
Uncharacterized protein.
    
 
 0.692
chiPu_0024533
Uncharacterized protein.
   
 
 0.692
chiPu_0026484
U-box domain-containing protein.
   
 
 0.690
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.