STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0006868Uncharacterized protein. (484 aa)    
Predicted Functional Partners:
chiPu_0029840
AMP-binding domain-containing protein.
   
 0.948
chiPu_0007859
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
  0.889
chiPu_0014725
PKS_AT domain-containing protein.
  
 
 0.856
chiPu_0004416
Carrier domain-containing protein.
     
 0.845
chiPu_0019835
AMP-binding domain-containing protein.
    
 0.843
chiPu_0011070
SCP2 domain-containing protein.
    
 0.835
chiPu_0001512
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.833
chiPu_0016090
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
  0.825
chiPu_0009559
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily.
    
 0.823
chiPu_0005945
Acetyl-coenzyme A synthetase.
     
 0.818
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.