STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0006850S1 motif domain-containing protein. (89 aa)    
Predicted Functional Partners:
chiPu_0002850
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
 0.914
chiPu_0001519
FDX-ACB domain-containing protein.
  
  
 0.861
TSFM
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.840
chiPu_0005336
Tr-type G domain-containing protein.
  
  
 0.822
chiPu_0006844
Tr-type G domain-containing protein.
  
  
 0.822
chiPu_0033521
KH domain-containing protein.
  
  
 0.808
chiPu_0033937
S1 motif domain-containing protein.
  
  
 0.808
chiPu_0002042
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
    0.783
chiPu_0018648
RPOLD domain-containing protein.
  
  
 0.770
chiPu_0020096
RPOLD domain-containing protein.
  
  
 0.770
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (24%) [HD]