STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0007378PPM-type phosphatase domain-containing protein. (360 aa)    
Predicted Functional Partners:
chiPu_0005588
Transket_pyr domain-containing protein.
   
 0.914
chiPu_0010454
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.901
chiPu_0009859
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 0.866
chiPu_0009860
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 0.866
chiPu_0028722
CC2-LZ domain-containing protein.
    
 0.863
chiPu_0027535
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.824
chiPu_0020787
N-acetyltransferase domain-containing protein.
    
   0.820
chiPu_0015400
N-acetyltransferase domain-containing protein.
    
   0.820
chiPu_0021076
Protein kinase domain-containing protein.
   
 0.810
chiPu_0005227
Mitogen-activated protein kinase.
   
 0.810
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.