STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0008005Ig-like domain-containing protein. (295 aa)    
Predicted Functional Partners:
chiPu_0004648
Ig-like domain-containing protein.
    
 0.992
chiPu_0020348
Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.
    
 0.934
chiPu_0011099
WD_REPEATS_REGION domain-containing protein.
    
 0.934
chiPu_0001117
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.912
chiPu_0000267
Uncharacterized protein.
    
 0.884
chiPu_0016229
PH domain-containing protein.
    
 0.884
chiPu_0011472
Uncharacterized protein.
    
 0.824
chiPu_0004646
Ig-like domain-containing protein.
    
  0.818
chiPu_0016215
Uncharacterized protein.
    
 0.792
chiPu_0016062
Uncharacterized protein.
   
 0.767
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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