STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0008142Uncharacterized protein. (1160 aa)    
Predicted Functional Partners:
chiPu_0016112
WASH_WAHD domain-containing protein.
   
 0.964
chiPu_0016167
Uncharacterized protein.
    
 0.956
chiPu_0016230
Uncharacterized protein.
  
 0.954
chiPu_0010686
CAP-ZIP_m domain-containing protein.
   
 
 0.923
chiPu_0023616
WASH-7_N domain-containing protein.
   
 
 0.902
chiPu_0002815
CAP-ZIP_m domain-containing protein.
   
 
 0.870
chiPu_0007496
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.825
chiPu_0012552
Peptidylprolyl isomerase.
    
 
 0.784
chiPu_0002439
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.751
chiPu_0004163
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.672
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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