STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0008344Uncharacterized protein. (148 aa)    
Predicted Functional Partners:
chiPu_0016838
Uncharacterized protein.
    
 0.973
chiPu_0006843
Ubiquitin-like domain-containing protein.
    
 0.956
chiPu_0017579
Uncharacterized protein.
    
 0.933
chiPu_0022870
Uncharacterized protein.
    
 0.933
chiPu_0020504
Ubiquitin-like domain-containing protein.
   
 0.921
chiPu_0010687
Uncharacterized protein.
   
 0.920
chiPu_0004492
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.917
chiPu_0010419
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.917
chiPu_0001502
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.900
chiPu_0003190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.900
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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