STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0008572MLVIN_C domain-containing protein. (223 aa)    
Predicted Functional Partners:
chiPu_0003185
Helicase C-terminal domain-containing protein.
    
 0.937
chiPu_0003187
Helicase ATP-binding domain-containing protein.
    
 0.937
chiPu_0017789
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.794
chiPu_0015376
Uncharacterized protein.
   
 
 0.692
chiPu_0024044
G6PD_C domain-containing protein.
   
 
 0.692
chiPu_0012791
Uncharacterized protein.
    
 0.682
chiPu_0018508
DIRP domain-containing protein.
    
 0.667
chiPu_0017867
WD_REPEATS_REGION domain-containing protein.
    
 0.637
chiPu_0005921
WD_REPEATS_REGION domain-containing protein.
    
 0.637
chiPu_0019213
dUTPase domain-containing protein.
    
 0.636
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.