STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0008695Ion_trans domain-containing protein. (193 aa)    
Predicted Functional Partners:
chiPu_0008724
Uncharacterized protein.
 
0.957
chiPu_0014756
Ion_trans domain-containing protein.
 
  
  0.947
chiPu_0008693
Uncharacterized protein.
 
  
 
0.940
chiPu_0008694
Ion_trans domain-containing protein.
 
   
  0.932
chiPu_0002589
Uncharacterized protein.
    
 0.887
chiPu_0009885
Uncharacterized protein.
    
 0.883
chiPu_0002357
Ion_trans domain-containing protein.
  
 
 0.865
chiPu_0013402
Ion_trans domain-containing protein.
   
 0.831
chiPu_0020735
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
 
0.824
chiPu_0013551
Uncharacterized protein.
    
 0.697
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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