STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0008810tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (611 aa)    
Predicted Functional Partners:
chiPu_0001868
Uncharacterized protein.
  
 0.995
chiPu_0000332
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.970
chiPu_0008012
Uncharacterized protein.
  
 0.970
chiPu_0027865
Uncharacterized protein.
   
 0.959
chiPu_0027833
tRNA-synt_1g domain-containing protein.
   
 0.959
chiPu_0001209
Tyrosine--tRNA ligase.
 
 0.955
chiPu_0005525
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.948
chiPu_0000346
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.947
chiPu_0009224
tRNA-synt_1d domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.947
chiPu_0001870
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.944
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.