STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0009017Uncharacterized protein. (1036 aa)    
Predicted Functional Partners:
chiPu_0014089
Aspartate aminotransferase.
   
 0.747
chiPu_0001446
CYTOSOL_AP domain-containing protein.
  
 0.719
chiPu_0010206
SERPIN domain-containing protein; Belongs to the serpin family.
  
 0.691
chiPu_0031824
PALP domain-containing protein.
    
 0.678
chiPu_0006843
Ubiquitin-like domain-containing protein.
    
  0.666
chiPu_0011308
Uncharacterized protein.
  
 
 0.666
chiPu_0016154
Uncharacterized protein.
    
 0.663
chiPu_0014375
Uncharacterized protein.
     
 0.661
chiPu_0017216
Uncharacterized protein.
    
 0.661
chiPu_0014211
CYTOSOL_AP domain-containing protein.
  
 0.656
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.