STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0008986WD_REPEATS_REGION domain-containing protein. (369 aa)    
Predicted Functional Partners:
chiPu_0012008
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.997
chiPu_0000547
ANK_REP_REGION domain-containing protein.
    
 0.979
chiPu_0000413
MPN domain-containing protein.
    
 0.967
chiPu_0007038
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.966
chiPu_0013843
MPN domain-containing protein.
    
 0.966
chiPu_0016732
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.964
chiPu_0015682
ANK_REP_REGION domain-containing protein.
    
 0.958
chiPu_0001598
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 
 0.953
chiPu_0016616
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.941
chiPu_0027076
Prot_ATP_ID_OB domain-containing protein.
    
 
 0.930
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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