STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0009117Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (297 aa)    
Predicted Functional Partners:
chiPu_0016675
Brix domain-containing protein.
   
 
 0.876
chiPu_0006678
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.792
chiPu_0009705
Ribosomal_L18_c domain-containing protein.
    
 
 0.753
chiPu_0027452
Uncharacterized protein.
    
 
 0.753
chiPu_0028874
Ribosomal_L18_c domain-containing protein.
    
 
 0.753
chiPu_0006172
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.739
chiPu_0014372
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.739
chiPu_0028811
WD_REPEATS_REGION domain-containing protein.
   
  
 0.648
chiPu_0012693
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
  
 
 
0.619
chiPu_0000142
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
   0.617
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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