STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0009143LysM domain-containing protein. (815 aa)    
Predicted Functional Partners:
chiPu_0022605
WD_REPEATS_REGION domain-containing protein.
   
  0.505
chiPu_0020912
WD_REPEATS_REGION domain-containing protein.
   
  0.505
chiPu_0010072
Uncharacterized protein.
      
 0.491
chiPu_0009694
Uncharacterized protein.
   
  0.463
chiPu_0010239
Uncharacterized protein.
   
  0.463
chiPu_0004284
Uncharacterized protein.
    
 
 0.437
chiPu_0021587
ATP-synt_ab_N domain-containing protein.
    
 
 0.417
chiPu_0000607
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 
 0.417
chiPu_0001453
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 
 0.417
chiPu_0027545
Uncharacterized protein.
    
 
 0.417
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.