STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0009325Uncharacterized protein. (809 aa)    
Predicted Functional Partners:
chiPu_0016306
Uncharacterized protein.
    
 0.962
chiPu_0004769
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.952
chiPu_0010667
JmjC domain-containing protein.
    
 0.947
chiPu_0017623
Uncharacterized protein.
    
 0.940
chiPu_0000867
Uncharacterized protein.
    
 0.940
chiPu_0016950
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.938
chiPu_0002553
Fe2OG dioxygenase domain-containing protein.
    
 0.931
chiPu_0012945
Fe2OG dioxygenase domain-containing protein.
    
 0.931
chiPu_0012983
Uncharacterized protein.
    
 0.931
chiPu_0006527
Uncharacterized protein.
    
 0.928
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.