STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0009355HD domain-containing protein. (232 aa)    
Predicted Functional Partners:
chiPu_0013166
LisH domain-containing protein.
    
 
 0.946
chiPu_0016994
dNK domain-containing protein.
   
 
 0.777
chiPu_0018903
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
    
 
 0.717
chiPu_0008388
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
    
 
 0.717
chiPu_0001410
dNK domain-containing protein.
   
 
 0.621
chiPu_0001970
dNK domain-containing protein.
   
 
 0.583
chiPu_0022831
dNK domain-containing protein.
   
 
 0.583
chiPu_0025407
Uncharacterized protein.
   
 
 0.579
chiPu_0009390
CPSF_A domain-containing protein.
    
 
 0.500
chiPu_0007726
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
     
 0.486
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.