STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0009808UBA domain-containing protein. (429 aa)    
Predicted Functional Partners:
chiPu_0022264
AAA domain-containing protein.
    
 
 0.675
chiPu_0022631
ATPase_AAA_core domain-containing protein.
    
 
 0.675
chiPu_0018770
AAA_lid_3 domain-containing protein.
    
 
 0.675
chiPu_0009134
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 
 0.675
chiPu_0016627
Uncharacterized protein.
    
 
 0.675
chiPu_0016963
Uncharacterized protein.
    
 
 0.675
chiPu_0025613
Vps4_C domain-containing protein.
    
 
 0.675
chiPu_0033182
ATPase_AAA_core domain-containing protein.
    
 
 0.675
chiPu_0019264
Uncharacterized protein.
   
 
  0.673
chiPu_0032471
Glycos_transf_1 domain-containing protein.
   
 
  0.673
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (22%) [HD]