STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0010424Sulfhydryl oxidase. (746 aa)    
Predicted Functional Partners:
chiPu_0005812
Uncharacterized protein.
     
 0.773
chiPu_0012984
Uncharacterized protein.
     
 0.773
chiPu_0005266
Uncharacterized protein; Belongs to the protein disulfide isomerase family.
     
0.756
chiPu_0008160
Uncharacterized protein; Belongs to the protein disulfide isomerase family.
     
0.756
chiPu_0024679
Fam20C domain-containing protein.
     
 0.664
chiPu_0003631
Fam20C domain-containing protein.
     
 0.660
chiPu_0017014
Fam20C domain-containing protein.
     
 0.653
chiPu_0008882
Fam20C domain-containing protein.
     
 0.641
chiPu_0014619
A4_EXTRA domain-containing protein.
     
 0.586
chiPu_0000952
Protein disulfide-isomerase.
     
0.557
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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