STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0010706Histidine ammonia-lyase; Belongs to the PAL/histidase family. (463 aa)    
Predicted Functional Partners:
chiPu_0032448
Uncharacterized protein.
 
 
 0.965
chiPu_0016386
Uncharacterized protein.
  
 
 0.941
chiPu_0010707
Amidohydro-rel domain-containing protein.
 
 
 0.910
chiPu_0001109
Arginase.
  
 
 0.872
chiPu_0004276
Arginase.
  
 
 0.872
chiPu_0007499
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.872
chiPu_0002177
M20_dimer domain-containing protein.
    
 0.865
chiPu_0009723
M20_dimer domain-containing protein.
    
 0.865
chiPu_0032589
Aminotran_1_2 domain-containing protein.
    
 0.857
chiPu_0032511
Uncharacterized protein; Belongs to the histidinol dehydrogenase family.
    
 0.830
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.