STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0011152Uncharacterized protein. (431 aa)    
Predicted Functional Partners:
chiPu_0007762
TGF_BETA_2 domain-containing protein.
     
 0.775
chiPu_0021913
TGF_BETA_2 domain-containing protein.
    
 0.764
chiPu_0009091
TGF_BETA_2 domain-containing protein.
    
 0.764
chiPu_0013383
Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.
     
 0.727
chiPu_0010567
Uncharacterized protein.
  
  
0.461
chiPu_0000613
GDNF family receptor alpha; Belongs to the GDNFR family.
  
  
0.455
chiPu_0011965
GDNF family receptor alpha; Belongs to the GDNFR family.
  
  
0.448
chiPu_0015005
Uncharacterized protein.
     
0.441
chiPu_0016417
Uncharacterized protein.
      
 0.426
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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