STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0011573Uncharacterized protein. (2590 aa)    
Predicted Functional Partners:
chiPu_0000466
Uncharacterized protein.
   
 
 0.962
chiPu_0002652
Uncharacterized protein.
   
 
 0.962
chiPu_0020892
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.951
chiPu_0008136
Uncharacterized protein.
    
 
 0.884
chiPu_0010901
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 
 0.862
chiPu_0012015
Uncharacterized protein.
   
 
 0.850
chiPu_0017960
Non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family.
   
 
  0.841
chiPu_0014001
Transcription elongation factor SPT5.
    
 
 0.841
chiPu_0023238
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
   
 
  0.841
chiPu_0023109
Uncharacterized protein.
   
 
  0.841
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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