STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0011749RING-type domain-containing protein. (893 aa)    
Predicted Functional Partners:
chiPu_0005580
Uncharacterized protein.
    
 
 0.850
chiPu_0008997
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.850
chiPu_0014775
Uncharacterized protein.
    
 
 0.841
chiPu_0000482
RING-type domain-containing protein.
    
 
 0.813
chiPu_0006277
Tr-type G domain-containing protein.
    
 
 0.791
chiPu_0007899
SEC63 domain-containing protein.
    
 
 0.787
chiPu_0007900
Uncharacterized protein.
    
 
 0.787
chiPu_0016547
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
    0.774
chiPu_0017530
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.758
chiPu_0001956
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.758
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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