STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0011896Uncharacterized protein. (767 aa)    
Predicted Functional Partners:
chiPu_0007310
Ribosomal_L2_C domain-containing protein.
    
 
 0.796
chiPu_0013997
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.788
chiPu_0021691
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
    
   0.785
chiPu_0019818
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
    
   0.785
chiPu_0016449
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.785
chiPu_0009081
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.772
chiPu_0017284
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.769
chiPu_0009630
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.759
chiPu_0024783
Uncharacterized protein.
    
 
 0.753
chiPu_0009259
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.752
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.