STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0011941AA_permease_C domain-containing protein. (773 aa)    
Predicted Functional Partners:
chiPu_0004949
Uncharacterized protein.
    
  0.773
chiPu_0014463
Uncharacterized protein.
    
  0.773
chiPu_0003466
DOMON domain-containing protein.
   
    0.705
chiPu_0008479
Uncharacterized protein.
   
  0.684
chiPu_0027098
Uncharacterized protein.
   
 0.675
chiPu_0017811
YrdC-like domain-containing protein.
   
 0.662
chiPu_0018372
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
     
 0.631
chiPu_0011477
Aamy domain-containing protein.
  
 0.631
chiPu_0019948
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
     
 0.629
chiPu_0014167
TIR domain-containing protein.
     
 0.629
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.