STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0011962Polysacc_synt_4 domain-containing protein. (197 aa)    
Predicted Functional Partners:
chiPu_0017860
Uncharacterized protein.
    
   0.857
chiPu_0004325
Uncharacterized protein.
    
   0.728
chiPu_0006173
Tr-type G domain-containing protein.
    
   0.728
chiPu_0008590
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.728
chiPu_0011085
Tr-type G domain-containing protein.
    
   0.728
chiPu_0015924
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.728
chiPu_0011641
Tr-type G domain-containing protein.
    
   0.719
chiPu_0009100
Uncharacterized protein.
   
    0.693
chiPu_0027253
Uncharacterized protein.
   
    0.585
chiPu_0002594
PINc domain-containing protein.
   
    0.574
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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