STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0012231ELAV-like protein; Belongs to the RRM elav family. (366 aa)    
Predicted Functional Partners:
chiPu_0014412
AMPKBI domain-containing protein.
    
  0.716
chiPu_0016055
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
 
0.692
chiPu_0007462
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
 
0.690
chiPu_0019376
Protein kinase domain-containing protein.
    
 0.689
chiPu_0005267
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
 
0.688
chiPu_0007832
RRM domain-containing protein.
  
 0.686
chiPu_0018903
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 
 0.676
chiPu_0001586
Uncharacterized protein.
  
0.676
chiPu_0008388
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 
 0.676
chiPu_0009326
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.675
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.