STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0012244JmjC domain-containing protein. (424 aa)    
Predicted Functional Partners:
chiPu_0017682
eRF1_1 domain-containing protein.
    
 
 0.789
chiPu_0018454
Uncharacterized protein.
   
  
 0.556
chiPu_0016794
Uncharacterized protein.
   
  
 0.541
chiPu_0014145
Fe2OG dioxygenase domain-containing protein.
   
  
 0.537
chiPu_0021912
2OG-FeII_Oxy_2 domain-containing protein.
   
  
 0.519
chiPu_0019823
JmjC domain-containing protein.
      
 0.519
chiPu_0001129
Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.
      
 0.514
chiPu_0005699
Cupin_8 domain-containing protein.
      
 0.512
chiPu_0005682
2OG-FeII_Oxy_2 domain-containing protein.
   
  
 0.511
chiPu_0007850
Uncharacterized protein.
   
  
 0.510
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (16%) [HD]