STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0012419Longin domain-containing protein; Belongs to the synaptobrevin family. (303 aa)    
Predicted Functional Partners:
chiPu_0001374
t-SNARE coiled-coil homology domain-containing protein.
   
 0.983
chiPu_0008647
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.983
chiPu_0022101
Longin domain-containing protein; Belongs to the synaptobrevin family.
    
 0.979
chiPu_0005761
Syntaxin-18_N domain-containing protein.
   
 0.979
chiPu_0002532
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.975
chiPu_0021617
Syntaxin-5_N domain-containing protein.
   
 0.973
chiPu_0021668
t-SNARE coiled-coil homology domain-containing protein.
   
 0.973
chiPu_0007099
TLC domain-containing protein.
    
 0.968
chiPu_0016585
t-SNARE coiled-coil homology domain-containing protein.
    
 0.966
chiPu_0007052
Uncharacterized protein.
    
 0.960
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.