STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0012515Uncharacterized protein. (1579 aa)    
Predicted Functional Partners:
chiPu_0012514
VWFA domain-containing protein.
 
     0.946
chiPu_0011033
Tudor domain-containing protein.
    
 0.838
chiPu_0009761
DNA polymerase.
   
 0.832
chiPu_0008008
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.829
chiPu_0012935
Small nuclear ribonucleoprotein Sm D2.
    
 0.828
chiPu_0027331
Sm domain-containing protein.
    
  0.812
chiPu_0001450
Uncharacterized protein.
    
 0.808
chiPu_0024108
DNA_pol_D_N domain-containing protein.
    
 0.808
chiPu_0019131
Small nuclear ribonucleoprotein G.
    
  0.805
chiPu_0014034
Uncharacterized protein.
   
 
 0.749
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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