STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0012539SCP domain-containing protein. (240 aa)    
Predicted Functional Partners:
chiPu_0013462
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
    
  0.828
chiPu_0017525
AFP-like domain-containing protein.
     
 0.661
chiPu_0009179
Uncharacterized protein.
     
 0.657
chiPu_0012199
Uncharacterized protein.
     
 0.657
chiPu_0003123
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.627
chiPu_0005946
Uncharacterized protein.
    
  0.620
chiPu_0005794
DAO domain-containing protein.
    
  0.553
chiPu_0028498
DAO domain-containing protein.
    
  0.553
chiPu_0011560
FAD-binding FR-type domain-containing protein.
    
  0.540
chiPu_0013332
Uncharacterized protein.
    
  0.540
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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