STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0012582Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (159 aa)    
Predicted Functional Partners:
chiPu_0012205
Uncharacterized protein.
   
 
 0.789
chiPu_0021617
Syntaxin-5_N domain-containing protein.
    
 
 0.719
chiPu_0021668
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.719
chiPu_0012716
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.692
chiPu_0022101
Longin domain-containing protein; Belongs to the synaptobrevin family.
    
 
 0.591
chiPu_0020743
LAM_G_DOMAIN domain-containing protein.
      
 0.553
chiPu_0012838
Uncharacterized protein.
      
 0.553
chiPu_0015634
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
   0.526
FSHR
Follicle-stimulating hormone receptor; G protein-coupled receptor for follitropin, the follicle- stimulating hormone. Through cAMP production activates the downstream PI3K-AKT and ERK1/ERK2 signaling pathways.
      
 0.521
chiPu_0010803
Uncharacterized protein.
      
 0.495
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.