STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0012667Protein phosphatase 1 regulatory subunit. (852 aa)    
Predicted Functional Partners:
chiPu_0009170
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
 0.959
chiPu_0002443
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
 0.933
chiPu_0006959
Uncharacterized protein.
  
 0.911
chiPu_0018729
Uncharacterized protein.
    
 0.807
chiPu_0001451
Uncharacterized protein.
   
 0.804
chiPu_0000902
Uncharacterized protein.
   
 0.753
chiPu_0002861
Uncharacterized protein.
   
 0.753
chiPu_0003722
Uncharacterized protein.
   
 0.753
chiPu_0000887
Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.745
chiPu_0002314
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
   
 0.745
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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