STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0012875Uncharacterized protein. (1956 aa)    
Predicted Functional Partners:
chiPu_0020746
DUF4704 domain-containing protein.
 
     0.934
chiPu_0000781
Uncharacterized protein.
    
  0.458
chiPu_0006252
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.458
chiPu_0006251
Uncharacterized protein.
    
  0.458
chiPu_0006250
L27_1 domain-containing protein.
    
  0.458
chiPu_0006442
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.458
chiPu_0023262
PDZ domain-containing protein.
    
  0.458
chiPu_0023936
PDZ domain-containing protein.
    
  0.458
chiPu_0022253
Guanylate kinase-like domain-containing protein.
    
  0.456
chiPu_0000780
L27 domain-containing protein.
    
  0.445
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.