STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0012968Carrier domain-containing protein. (2044 aa)    
Predicted Functional Partners:
chiPu_0012864
Uncharacterized protein.
  
 0.985
chiPu_0019556
ACPS domain-containing protein.
   
 0.984
chiPu_0003122
AMP-binding domain-containing protein.
  
 0.984
chiPu_0014725
PKS_AT domain-containing protein.
  
 0.977
chiPu_0014592
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
   
 0.974
chiPu_0007339
Aminotran_1_2 domain-containing protein.
   
 0.944
chiPu_0011070
SCP2 domain-containing protein.
   
 0.911
chiPu_0012805
Aminotran_1_2 domain-containing protein.
   
 0.901
chiPu_0014658
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.885
chiPu_0014657
PALB2_WD40 domain-containing protein.
  
 
 0.885
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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