STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0013117Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (281 aa)    
Predicted Functional Partners:
chiPu_0006892
Uncharacterized protein.
   
 0.869
chiPu_0012601
GRANULINS domain-containing protein.
   
 0.869
chiPu_0021266
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
0.863
chiPu_0000763
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
0.862
chiPu_0018265
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.843
chiPu_0010245
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
0.835
chiPu_0002517
Uncharacterized protein.
     
 0.812
chiPu_0006315
Uncharacterized protein.
     
 0.812
chiPu_0005040
Uncharacterized protein.
   
 
  0.810
chiPu_0015576
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.787
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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