STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0013302PRORP domain-containing protein. (578 aa)    
Predicted Functional Partners:
chiPu_0007414
SAM-dependent MTase TRM10-type domain-containing protein.
   
 0.986
chiPu_0019886
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.972
chiPu_0028736
Uncharacterized protein.
    
 0.972
chiPu_0012567
SAM-dependent MTase TRM10-type domain-containing protein.
   
 0.880
chiPu_0008421
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
     
 0.844
chiPu_0007657
Uncharacterized protein.
   
 
 0.793
chiPu_0004396
Uncharacterized protein.
   
 
 0.721
chiPu_0004172
POP4 domain-containing protein.
     
 0.716
chiPu_0009473
Uncharacterized protein.
  
    0.709
chiPu_0021265
Uncharacterized protein.
   
 
 0.708
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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