STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0013826Uroporphyrinogen_deCOase domain-containing protein. (298 aa)    
Predicted Functional Partners:
chiPu_0016282
Uncharacterized protein.
 0.992
chiPu_0026319
Amino_oxidase domain-containing protein.
  
 
 0.981
chiPu_0031504
Uncharacterized protein.
  
 
 0.952
chiPu_0008919
Uncharacterized protein.
  
 0.938
chiPu_0008630
HEM4 domain-containing protein.
  
 
 0.925
chiPu_0008956
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.922
chiPu_0029807
BATS domain-containing protein.
  
 
 0.839
chiPu_0004667
Flavodoxin-like domain-containing protein.
    
  0.821
chiPu_0028854
Glu_synthase domain-containing protein.
    
 0.783
chiPu_0032047
Fer4_20 domain-containing protein.
    
 0.783
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.