STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0013994SMP-LTD domain-containing protein. (1068 aa)    
Predicted Functional Partners:
chiPu_0012042
RRM domain-containing protein.
     
  0.756
chiPu_0000684
Uncharacterized protein.
 
   
  0.638
chiPu_0001485
Uncharacterized protein.
 
   
  0.638
chiPu_0004794
Uncharacterized protein.
 
   
  0.638
chiPu_0007983
Uncharacterized protein.
 
   
  0.638
chiPu_0005302
L-type lectin-like domain-containing protein.
    
  0.606
chiPu_0011113
Uncharacterized protein.
   
  0.606
chiPu_0020061
MSP domain-containing protein.
    
 0.577
chiPu_0005955
MSP domain-containing protein.
    
 0.577
chiPu_0018627
L-type lectin-like domain-containing protein.
    
  0.559
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.