STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0014483MFS domain-containing protein. (231 aa)    
Predicted Functional Partners:
chiPu_0014482
Uncharacterized protein.
 
      0.900
chiPu_0007897
Uncharacterized protein.
    
  0.776
chiPu_0029996
AB hydrolase-1 domain-containing protein.
    
 0.648
chiPu_0030515
Gp_dh_C domain-containing protein.
   
 0.628
chiPu_0031018
Peptidase_S49 domain-containing protein.
   
 0.628
chiPu_0010173
Suf domain-containing protein.
    
 0.593
chiPu_0002519
Thymidine kinase.
     
 0.591
chiPu_0028920
Uncharacterized protein.
   
 0.581
chiPu_0000894
Thymidylat_synt domain-containing protein.
    
  0.578
chiPu_0026055
Uncharacterized protein.
   
 
 0.570
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.