STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0014619A4_EXTRA domain-containing protein. (654 aa)    
Predicted Functional Partners:
chiPu_0003044
Uncharacterized protein.
    
 0.918
chiPu_0016408
Uncharacterized protein.
    
 0.918
chiPu_0016448
Uncharacterized protein.
    
 0.918
chiPu_0016718
Uncharacterized protein.
    
 0.918
chiPu_0023549
Uncharacterized protein.
    
 0.918
chiPu_0004620
Uncharacterized protein.
    
 0.905
chiPu_0027558
Uncharacterized protein.
    
 0.905
chiPu_0014876
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
  0.903
chiPu_0000682
Uncharacterized protein; Belongs to the peptidase M16 family.
    
 
 0.895
chiPu_0010447
M16C_associated domain-containing protein.
    
 
 0.869
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.