STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0014623SASA domain-containing protein. (505 aa)    
Predicted Functional Partners:
chiPu_0015692
Uncharacterized protein.
      
 0.553
chiPu_0016679
SEFIR domain-containing protein.
      
 0.553
chiPu_0016779
DBB domain-containing protein.
      
 0.553
chiPu_0010102
Tyrosine-protein kinase.
      
 0.552
chiPu_0005775
Uncharacterized protein.
    
 
 0.530
chiPu_0013183
Alpha-mann_mid domain-containing protein.
    
 
 0.530
chiPu_0002645
Uncharacterized protein.
      
 0.529
chiPu_0001377
Cas1_AcylT domain-containing protein.
      
 0.522
chiPu_0002627
Uncharacterized protein.
      
 0.493
chiPu_0020485
WD_REPEATS_REGION domain-containing protein.
      
 0.491
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.