STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0014680Uncharacterized protein. (824 aa)    
Predicted Functional Partners:
chiPu_0013696
Decorin; May affect the rate of fibrils formation.
     
 0.706
chiPu_0011154
Hexosyltransferase.
      
 0.511
chiPu_0019812
Uncharacterized protein.
      
 0.502
chiPu_0003977
LRRNT domain-containing protein.
     
 0.481
chiPu_0003978
LRRNT domain-containing protein.
     
 0.481
chiPu_0033826
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
     
 0.464
chiPu_0021819
Sushi domain-containing protein.
     
 0.428
chiPu_0004041
Uncharacterized protein.
     
 0.428
chiPu_0003120
Carbohydrate sulfotransferase.
      
 0.426
chiPu_0016049
Uncharacterized protein.
      
 0.404
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.