chiPu_0014789 protein (Chiloscyllium punctatum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

chiPu_0014789

Uncharacterized protein. (256 aa)

Predicted Functional Partners:

chiPu_0006356

0.881

chiPu_0002736

0.786

chiPu_0014244

0.770

chiPu_0011587

0.547

chiPu_0012695

0.492

chiPu_0031930

0.488

chiPu_0012642

0.462

chiPu_0000837

0.460

chiPu_0006798

0.460

chiPu_0016355

0.460

Your Current Organism:

Chiloscyllium punctatum

NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
chiPu_0000837	chiPu_0002736	A0A401RWE7	A0A401S1T1	Uncharacterized protein.	Uncharacterized protein.	0.732
chiPu_0000837	chiPu_0006798	A0A401RWE7	A0A401SDA0	Uncharacterized protein.	Uncharacterized protein.	0.472
chiPu_0000837	chiPu_0011587	A0A401RWE7	A0A401SRU0	Uncharacterized protein.	Uncharacterized protein.	0.634
chiPu_0000837	chiPu_0012642	A0A401RWE7	A0A401SUU7	Uncharacterized protein.	Uncharacterized protein.	0.492
chiPu_0000837	chiPu_0012695	A0A401RWE7	A0A401SV03	Uncharacterized protein.	Uncharacterized protein.	0.507
chiPu_0000837	chiPu_0014244	A0A401RWE7	A0A401SZE8	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.678
chiPu_0000837	chiPu_0014789	A0A401RWE7	A0A401T0W5	Uncharacterized protein.	Uncharacterized protein.	0.460
chiPu_0000837	chiPu_0031930	A0A401RWE7	A0A401TYM0	Uncharacterized protein.	Uncharacterized protein.	0.438
chiPu_0002736	chiPu_0000837	A0A401S1T1	A0A401RWE7	Uncharacterized protein.	Uncharacterized protein.	0.732
chiPu_0002736	chiPu_0006356	A0A401S1T1	A0A401SC47	Uncharacterized protein.	Uncharacterized protein.	0.990
chiPu_0002736	chiPu_0006798	A0A401S1T1	A0A401SDA0	Uncharacterized protein.	Uncharacterized protein.	0.800
chiPu_0002736	chiPu_0011587	A0A401S1T1	A0A401SRU0	Uncharacterized protein.	Uncharacterized protein.	0.875
chiPu_0002736	chiPu_0012642	A0A401S1T1	A0A401SUU7	Uncharacterized protein.	Uncharacterized protein.	0.803
chiPu_0002736	chiPu_0012695	A0A401S1T1	A0A401SV03	Uncharacterized protein.	Uncharacterized protein.	0.809
chiPu_0002736	chiPu_0014244	A0A401S1T1	A0A401SZE8	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.984
chiPu_0002736	chiPu_0014789	A0A401S1T1	A0A401T0W5	Uncharacterized protein.	Uncharacterized protein.	0.786
chiPu_0002736	chiPu_0016355	A0A401S1T1	A0A401T5E9	Uncharacterized protein.	Uncharacterized protein.	0.732
chiPu_0006356	chiPu_0002736	A0A401SC47	A0A401S1T1	Uncharacterized protein.	Uncharacterized protein.	0.990
chiPu_0006356	chiPu_0006798	A0A401SC47	A0A401SDA0	Uncharacterized protein.	Uncharacterized protein.	0.821
chiPu_0006356	chiPu_0011587	A0A401SC47	A0A401SRU0	Uncharacterized protein.	Uncharacterized protein.	0.753