chiPu_0014863 protein (Chiloscyllium punctatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

chiPu_0014863

EXPERA domain-containing protein. (201 aa)

Predicted Functional Partners:

chiPu_0005528

0.900

chiPu_0004649

0.897

chiPu_0018338

0.895

chiPu_0013829

0.877

chiPu_0005256

0.871

chiPu_0005462

0.871

chiPu_0003865

0.800

chiPu_0019071

0.797

chiPu_0016316

0.797

chiPu_0000203

0.787

Your Current Organism:

Chiloscyllium punctatum

NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
chiPu_0000203	chiPu_0005256	A0A401RSC8	A0A401S8Y6	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.995
chiPu_0000203	chiPu_0005462	A0A401RSC8	A0A401S9G5	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	Uncharacterized protein.	0.995
chiPu_0000203	chiPu_0013829	A0A401RSC8	A0A401SYF4	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.	0.996
chiPu_0000203	chiPu_0014863	A0A401RSC8	A0A401T144	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	EXPERA domain-containing protein.	0.787
chiPu_0000203	chiPu_0018338	A0A401RSC8	A0A401RMG2	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.994
chiPu_0003865	chiPu_0004649	A0A401S4Y4	A0A401S760	Uncharacterized protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.996
chiPu_0003865	chiPu_0005528	A0A401S4Y4	A0A401S9N1	Uncharacterized protein.	FAD-binding PCMH-type domain-containing protein.	0.973
chiPu_0003865	chiPu_0014863	A0A401S4Y4	A0A401T144	Uncharacterized protein.	EXPERA domain-containing protein.	0.800
chiPu_0003865	chiPu_0016316	A0A401S4Y4	A0A401T596	Uncharacterized protein.	Tudor domain-containing protein.	0.742
chiPu_0003865	chiPu_0019071	A0A401S4Y4	A0A401RQL5	Uncharacterized protein.	Uncharacterized protein.	0.737
chiPu_0004649	chiPu_0003865	A0A401S760	A0A401S4Y4	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.996
chiPu_0004649	chiPu_0005528	A0A401S760	A0A401S9N1	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	FAD-binding PCMH-type domain-containing protein.	0.953
chiPu_0004649	chiPu_0014863	A0A401S760	A0A401T144	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	EXPERA domain-containing protein.	0.897
chiPu_0004649	chiPu_0016316	A0A401S760	A0A401T596	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Tudor domain-containing protein.	0.991
chiPu_0004649	chiPu_0019071	A0A401S760	A0A401RQL5	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.991
chiPu_0005256	chiPu_0000203	A0A401S8Y6	A0A401RSC8	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.995
chiPu_0005256	chiPu_0013829	A0A401S8Y6	A0A401SYF4	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	Uncharacterized protein; Belongs to the V-ATPase proteolipid subunit family.	0.998
chiPu_0005256	chiPu_0014863	A0A401S8Y6	A0A401T144	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	EXPERA domain-containing protein.	0.871
chiPu_0005256	chiPu_0018338	A0A401S8Y6	A0A401RMG2	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.998
chiPu_0005462	chiPu_0000203	A0A401S9G5	A0A401RSC8	Uncharacterized protein.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.995