STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0015003FAM83 domain-containing protein. (971 aa)    
Predicted Functional Partners:
chiPu_0004721
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.695
chiPu_0001287
Uncharacterized protein.
    
   0.537
chiPu_0005440
Protein kinase domain-containing protein.
    
 
 0.535
chiPu_0015820
SMB domain-containing protein; Belongs to the peptidase C1 family.
      
 0.493
chiPu_0003268
Uncharacterized protein.
      
 0.436
chiPu_0005272
Uncharacterized protein.
      
 0.436
chiPu_0007329
DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.
      
 0.435
chiPu_0014024
Protein kinase domain-containing protein.
    
 
 0.432
chiPu_0024968
Uncharacterized protein.
    
 
 0.432
chiPu_0002578
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.412
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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