STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0015048Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
chiPu_0008421
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.953
chiPu_0004396
Uncharacterized protein.
    
 0.947
chiPu_0004172
POP4 domain-containing protein.
    
 0.946
chiPu_0007657
Uncharacterized protein.
    
  0.942
chiPu_0015906
Alba domain-containing protein.
   
 0.938
chiPu_0006297
Alba domain-containing protein.
   
 0.921
chiPu_0021681
Uncharacterized protein.
   
 0.865
chiPu_0021038
Uncharacterized protein.
   
 0.865
chiPu_0002975
LIM domain-containing protein.
   
 0.865
chiPu_0021149
Uncharacterized protein.
    
 0.663
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.