STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0015341RRM domain-containing protein. (345 aa)    
Predicted Functional Partners:
chiPu_0013462
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
   
 0.952
chiPu_0021400
Nop domain-containing protein.
   
    0.873
chiPu_0018295
Uncharacterized protein.
     
 0.859
chiPu_0027054
Uncharacterized protein.
     
 0.859
chiPu_0016968
Uncharacterized protein.
  
 
 0.855
chiPu_0001415
Uncharacterized protein.
    
 0.852
chiPu_0031123
Uncharacterized protein.
    
 0.852
chiPu_0018487
Uncharacterized protein.
   
 0.846
chiPu_0011146
Uncharacterized protein.
   
 0.846
chiPu_0024181
Uncharacterized protein.
   
 0.846
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.