STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0015475Aldo_ket_red domain-containing protein. (353 aa)    
Predicted Functional Partners:
chiPu_0002311
Uncharacterized protein; Belongs to the potassium channel family.
    
 0.886
chiPu_0016232
Uncharacterized protein.
   
 0.878
chiPu_0010289
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.876
chiPu_0015585
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.876
chiPu_0001878
Uncharacterized protein.
    
 0.871
chiPu_0011945
Uncharacterized protein.
    
 0.871
chiPu_0013789
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.870
chiPu_0009994
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.869
chiPu_0020828
BTB domain-containing protein; Belongs to the potassium channel family.
   
 0.865
chiPu_0006655
BTB domain-containing protein; Belongs to the potassium channel family.
   
 0.865
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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