STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_001549540S_SA_C domain-containing protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family. (321 aa)    
Predicted Functional Partners:
chiPu_0020433
Uncharacterized protein.
  
 
 0.999
chiPu_0020504
Ubiquitin-like domain-containing protein.
  
 0.999
chiPu_0017501
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.999
chiPu_0017574
Ribosomal_L28e domain-containing protein.
   
 
 0.999
chiPu_0022323
Uncharacterized protein.
  
 0.999
chiPu_0021691
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
chiPu_0020880
40S ribosomal protein S27.
   
 0.999
chiPu_0018209
Ribosomal_L7Ae domain-containing protein.
  
 0.999
chiPu_0019235
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.999
chiPu_0019388
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.